experimental_design_file_format
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experimental_design_file_format [2016/04/28 14:01] fsalavert |
experimental_design_file_format [2020/04/03 20:18] (current) |
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| + | ====== Experimental design file format ====== | ||
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| Experimental design is Tab-separated values file. This file has two columns, the first one corresponds to the sample name and the second one corresponds to the phenotype. | Experimental design is Tab-separated values file. This file has two columns, the first one corresponds to the sample name and the second one corresponds to the phenotype. | ||
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| + | **Note**: In case of **paired data** the Experimental design file must be **ordered**. | ||
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| + | Here is an example of a file with 4 piared samples (sample1_Normal and sample1_Treated are the same sample before and after treatment): | ||
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| + | <code> | ||
| + | sample1_Normal Group_1 | ||
| + | sample2_Normal Group_1 | ||
| + | sample1_Treated Group_2 | ||
| + | sample2_Treated Group_2 | ||
| + | </code> | ||
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| + | Here is an other file example see {{:brca_normal-basal_ed.txt|}}. | ||
experimental_design_file_format.1461852104.txt.gz ยท Last modified: 2020/04/03 20:17 (external edit)
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