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perturbation_effect [2020/02/05 16:59] krian [Study information] |
perturbation_effect [2020/04/03 20:18] (current) |
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* **[[Expression matrix file format |Expression matrix file]]** : Expression matrix provided by ourselves (see how to upload files in [[upload_your_data|Upload your data]]). | * **[[Expression matrix file format |Expression matrix file]]** : Expression matrix provided by ourselves (see how to upload files in [[upload_your_data|Upload your data]]). | ||
{{ ::expmatrfile.png?nolink |}} | {{ ::expmatrfile.png?nolink |}} | ||
+ | When we select a gene expression file, the number of samples of this matrix will appear under the “File browser” button as shown below. | ||
+ | {{ ::pertnumberofsamples.png?nolink |}} | ||
==== Sample ==== | ==== Sample ==== | ||
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All study states are: | All study states are: | ||
* **Queued**: The information has been processed and the study has been sent and waits to be processed. | * **Queued**: The information has been processed and the study has been sent and waits to be processed. | ||
+ | {{ ::queuedpereff.png?nolink |}} | ||
* **Running**: The study is in progress, study can be cancelled using the stop button. | * **Running**: The study is in progress, study can be cancelled using the stop button. | ||
- | {{ ::stopbtn.png?nolink |}} | + | {{ ::runingperteffect.png?nolink |}} |
* **Done**: The study has ended and the results are available to visualize and download. | * **Done**: The study has ended and the results are available to visualize and download. | ||
* **Cancelled**: The study was canceled before finishing. | * **Cancelled**: The study was canceled before finishing. | ||
- | * **Error**: Sometimes a study can stop returning a error message, you can report and contact us in order to help you to fix it.\\ see [[workflow|Workflow]] for further information. | + | * **Error**: Sometimes a study can stop returning a error message, you can report and contact us in order to help you to fix it. |
- | {{ ::run_study.png?nolink |}} | + | {{ ::studiesperteffect.png?nolink |}} |