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start [2016/02/25 11:26] – mhidalgo | start [2024/03/08 12:10] (current) – krian | ||
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====== Welcome to HiPathia! ====== | ====== Welcome to HiPathia! ====== | ||
- | HiPathia is a web tool for the interpretation of the consequences of the combined changes of gene expression levels and/or genomic mutations in the context of signalling pathways. | + | HiPathia is a web tool for the interpretation of the consequences of the combined changes of gene expression levels and/or genomic mutations in the context of signalling pathways. |
+ | HiPathia | ||
Along this tutorial you will learn how to use the HiPathia pathway suite and find different worked examples. | Along this tutorial you will learn how to use the HiPathia pathway suite and find different worked examples. | ||
- | * [[What can do HiPathia for you|What can do HiPathia for you]] | + | {{ :home.png? |
- | + | ||
- | * How to use HiPathia: | + | |
- | * [[Logging in|Logging in]] | + | |
- | * [[General overview|General overview]] | + | |
- | * [[Workflow|Workflow]] | + | |
- | * [[Upload your data|Upload your data]] | + | |
- | + | ||
- | * Tools: | + | |
- | * [[Differential signaling|Differential signaling]] | + | |
- | * [[Prediction|Prediction]] | + | |
- | + | ||
- | * Worked examples: | + | |
- | * [[Worked example Differential example|Worked example Differential signaling]] | + | |
- | * [[Worked example Prediction - Train|Worked example Prediction - Train]] | + | |
- | * [[Worked example Prediction|Worked example Prediction - Test]] | + | |
- | + | ||
- | * For further learning: | + | |
- | * [[Differential signaling exercises|Differential signaling exercises]] | + | |
+ | The HiPathia web server integrates four different pathway analysis modules: | ||
+ | * **[[differential_signaling|Differential signaling]]** provides an estimation of significant cell signaling activity changes across different conditions. | ||
+ | * **[[Prediction|Prediction]]** allows you to train a prediction test and test it with different data. | ||
+ | * **[[Perturbation effect|Perturbation effect]]** | ||
+ | * **[[vafin|Variant interpreter]]** |
start.1456399598.txt.gz · Last modified: 2017/05/24 13:54 (external edit)