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start [2020/01/26 17:42] – krian | start [2024/03/08 12:10] (current) – krian | ||
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HiPathia is a web tool for the interpretation of the consequences of the combined changes of gene expression levels and/or genomic mutations in the context of signalling pathways. | HiPathia is a web tool for the interpretation of the consequences of the combined changes of gene expression levels and/or genomic mutations in the context of signalling pathways. | ||
- | HiPathia transforms uninformative gene expression and/or genomic variation data into signalling | + | HiPathia transforms uninformative gene expression and/or genomic variation data into signaling |
Along this tutorial you will learn how to use the HiPathia pathway suite and find different worked examples. | Along this tutorial you will learn how to use the HiPathia pathway suite and find different worked examples. | ||
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{{ : | {{ : | ||
- | The HiPathia web server integrates | + | The HiPathia web server integrates |
* **[[differential_signaling|Differential signaling]]** provides an estimation of significant cell signaling activity changes across different conditions. | * **[[differential_signaling|Differential signaling]]** provides an estimation of significant cell signaling activity changes across different conditions. | ||
* **[[Prediction|Prediction]]** allows you to train a prediction test and test it with different data. | * **[[Prediction|Prediction]]** allows you to train a prediction test and test it with different data. | ||
- | * **[[Perturbation effect|Perturbation effect]** | + | * **[[Perturbation effect|Perturbation effect]]** is an interactive working environment to simulate the effect of different interventions (e.g. knock-out, over-expression, drugs, etc.) over the activity of signaling circuits in the pathways, as well as their potential functional consequences in the cell. |
* **[[vafin|Variant interpreter]]** | * **[[vafin|Variant interpreter]]** |
start.1580060552.txt.gz · Last modified: 2020/01/26 17:42 by krian