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species [2015/12/18 17:02] mhidalgo |
species [2020/04/03 20:18] (current) |
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* Rat (Rattus norvegicus) | * Rat (Rattus norvegicus) | ||
- | When a **VCF file has been selected**, only Human species can be selected. Also, we need to specify some further parameters: | ||
- | * Reference genome: Select either reference genome GRCh37 or GRCh38 | ||
- | * Inheritance pattern: Select the kind of inheritance pattern, either recessive or dominant. | ||
- | * Compound hetero: Select if heterozygote compounds must be considered. | ||
- | * SIFT, PolyPhen, PhastCons: Select which tools must be used on order to infer the impact of the mutations in the expression profile. At least one must be selected. | ||