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species [2015/12/21 09:43] mhidalgo |
species [2020/04/03 20:18] (current) |
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* Rat (Rattus norvegicus) | * Rat (Rattus norvegicus) | ||
- | When a **VCF file has been selected**, only Human species can be selected. Also, we need to specify some further parameters: | ||
- | * **Reference genome**: Select either reference genome GRCh37 or GRCh38 | ||
- | * **Inheritance pattern**: Select the kind of inheritance pattern, either recessive or dominant. | ||
- | * **Compound hetero**: Select if heterozygote compounds must be considered. | ||
- | * **SIFT, PolyPhen, PhastCons**: Select which tools must be used on order to infer the impact of the mutations in the expression profile. At least one must be selected. | ||