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species

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====== Species ====== Here we must choose the species of our experiment. You can choose among: * Human (Homo sapiens) * Mouse (Mus musculus) * Rat (Rattus norvegicus) When a **VCF file has been selected**, only Human species can be selected. Also, we need to specify some further parameters: * **Reference genome**: Select either reference genome GRCh37 or GRCh38 * **Inheritance pattern**: Select the kind of inheritance pattern, either recessive or dominant. * **Compound hetero**: Select if heterozygote compounds must be considered. * **SIFT, PolyPhen, PhastCons**: Select which tools must be used in order to infer the impact of the mutations in the expression profile. At least one of them must be selected.

species.1450691045.txt.gz · Last modified: 2020/04/03 20:18 (external edit)