Differences

This shows you the differences between two versions of the page.

--- upload_your_data [2020/02/20 16:24] – [Upload your data] krian
+++ upload_your_data [2021/01/07 13:40] (current) – krian
@@ Line 4: / Line 4: @@
 Follow the following steps to upload your data to **HiPathia**.
-{{ :hipathia_upload1_5.png?600 |}}
+{{ ::hipathia_upload1_5.png |}}
 **1-** Either select the //My data// button in the upper bar of the HiPathia web or the //File browser// option of each pathway tool.
@@ Line 12: / Line 12: @@
 **3-** Select the folder in which you want to upload your data by navigating through your folders. Press the //Upload// button in the upper part of the folder you have selected. A window will appear.
-{{ :hipathia_upload2_5_1.png?600 |}}
+{{ ::hipathia_upload2_5_1.png |}}
 **4-** Click on the //Choose file// button and select the data file from your computer by navigating through your local files.
@@ Line 22: / Line 22: @@
   * **Gene List**: is Tab-separated values file. This file has just one column, that is the Entrez ID of genes (1 Entrez ID per line).
-**6-** Select the //Upload// button and your data will be upload.
+Please check the //File validation log//before Clicking //Upload// button. For example in the following image, you can see that the selected file has 631 Errors.
+{{ ::filevalidationlog.png |}}
+In the file Validation panel, you can see three kinds of notification :
+  * **Errors**: are critical problems with the selected file such as big size, file format, or wrong selected data type.  Errors stop the Hipathia web tool from uploading and must be corrected locally then repeat from the fourth step.
+  * **Warnings**: are notices that alert the user to pay particular attention to specific instructions such as [[data_format#character_encoding|file encoding]], The user may choose whether or not they wish to upload the file that prompted the warning.\\ The user may have some later problems in the launched study, such as an empty uploaded file or file with undefined characters.
+  * **Info**: are some extra information about the selected file.
+In the following video you can see some examples of possible Errors:
+{{::filevalidatorlog.mp4?900|File validation logs}}
+**6-** Click the //Upload// button and your data will be upload.
 ===== Video tutorial  =====
 {{::uploaddata.mp4?900|}}