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perturbation_effect [2020/02/05 16:59] – [Study information] krianperturbation_effect [2021/01/26 16:10] (current) – update old results example ialamo
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   * **[[Expression matrix file format |Expression matrix file]]** : Expression matrix provided by ourselves (see how to upload files in [[upload_your_data|Upload your data]]).   * **[[Expression matrix file format |Expression matrix file]]** : Expression matrix provided by ourselves (see how to upload files in [[upload_your_data|Upload your data]]).
 {{ ::expmatrfile.png?nolink |}} {{ ::expmatrfile.png?nolink |}}
 +When we select a gene expression file, the number of samples of this matrix will appear under the “File browser” button as shown below. 
 +{{ ::pertnumberofsamples.png?nolink |}}
 ==== Sample ==== ==== Sample ====
  
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 All study states are:  All study states are: 
   * **Queued**: The information has been processed and the study has been sent and waits to be processed.   * **Queued**: The information has been processed and the study has been sent and waits to be processed.
 +{{ ::queuedpereff.png?nolink |}}
   * **Running**: The study is in progress, study can be cancelled using the stop button.   * **Running**: The study is in progress, study can be cancelled using the stop button.
-{{ ::stopbtn.png?nolink |}}+{{ ::runingperteffect.png?nolink |}}
   * **Done**: The study has ended and the results are available to visualize and download.   * **Done**: The study has ended and the results are available to visualize and download.
   * **Cancelled**: The study was canceled before finishing.   * **Cancelled**: The study was canceled before finishing.
-  * **Error**: Sometimes a study can stop returning a error message, you can report and contact us in order to help you to fix it.\\ see [[workflow|Workflow]] for further information+  * **Error**: Sometimes a study can stop returning a error message, you can report and contact us in order to help you to fix it. 
-{{ ::run_study.png?nolink |}}+{{ ::studiesperteffect.png?nolink |}}
  
  
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 Last update gene list Last update gene list
  
-==== Interpretation of the results ==== +==== Worked example and Interpretation of the results ==== 
- For further information about the interpretation of the results, see [[Perturbation effect results|Perturbation effect results]]. +You can find an example of the use of this tool and the interpretation of the results at [[worked_example_perturbation_effect|Worked example: Perturbation effect]].
- +
perturbation_effect.1580921949.txt.gz · Last modified: 2020/02/05 16:59 by krian